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  5. Smo97725

Smo97725


Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF2 assembly factor


Gene families : OG0002567 (Archaeplastida) Phylogenetic Tree(s): OG0002567_tree ,
OG_05_0007595 (LandPlants) Phylogenetic Tree(s): OG_05_0007595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo97725
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT5G51110 No alias Transcriptional coactivator/pterin dehydratase 0.05 Archaeplastida
ChrSy.fgenesh.mRNA.86 No alias RAF2 assembly factor involved in RuBisCo assembly 0.01 Archaeplastida
GSVIVT01013845001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Gb_11396 No alias RAF2 assembly factor involved in RuBisCo assembly 0.05 Archaeplastida
Mp2g24300.1 No alias RAF2 assembly factor involved in RuBisCo assembly 0.02 Archaeplastida
Solyc03g094175.1.1 No alias RAF2 assembly factor involved in RuBisCo assembly 0.03 Archaeplastida
Solyc03g094177.1.1 No alias RAF2 assembly factor involved in RuBisCo assembly 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001533 Pterin_deHydtase 65 163
No external refs found!