Smo98330


Description : Cell cycle.interphase.DNA replication.preinitiation.TOP2 DNA topoisomerase


Gene families : OG0003355 (Archaeplastida) Phylogenetic Tree(s): OG0003355_tree ,
OG_05_0004398 (LandPlants) Phylogenetic Tree(s): OG_05_0004398_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98330
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00101630 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.12 Archaeplastida
AT3G23890 TOPII, ATTOPII topoisomerase II 0.1 Archaeplastida
Cpa|evm.model.tig00021432.55 No alias DNA topoisomerase 2 OS=Pisum sativum 0.03 Archaeplastida
Cpa|evm.model.tig00021433.2 No alias DNA topoisomerase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre01.g009250 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.02 Archaeplastida
GSVIVT01032138001 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.11 Archaeplastida
Gb_11673 No alias DNA topoisomerase (TOP2) 0.1 Archaeplastida
Gb_12824 No alias DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 112.0) 0.1 Archaeplastida
LOC_Os02g47150.1 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
MA_133272g0010 No alias DNA topoisomerase (TOP2) 0.05 Archaeplastida
MA_6634g0010 No alias DNA topoisomerase (TOP2) 0.05 Archaeplastida
Mp3g13420.1 No alias DNA topoisomerase (TOP2) 0.05 Archaeplastida
Pp3c18_20260V3.1 No alias topoisomerase II 0.1 Archaeplastida
Pp3c19_3610V3.1 No alias topoisomerase II 0.07 Archaeplastida
Solyc01g087500.3.1 No alias DNA topoisomerase (TOP2) 0.07 Archaeplastida
Zm00001e015542_P001 No alias DNA topoisomerase (TOP2) 0.07 Archaeplastida
Zm00001e023296_P001 No alias DNA topoisomerase (TOP2) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003594 HATPase_C 61 208
No external refs found!