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  5. Smo98534

Smo98534


Description : External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.SPA regulator component


Gene families : OG0000790 (Archaeplastida) Phylogenetic Tree(s): OG0000790_tree ,
OG_05_0001763 (LandPlants) Phylogenetic Tree(s): OG_05_0001763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98534
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00174010 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00097p00139510 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red... 0.02 Archaeplastida
AT1G53090 SPA4 SPA1-related 4 0.04 Archaeplastida
AT3G15354 SPA3 SPA1-related 3 0.05 Archaeplastida
Cre02.g085050 No alias E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01007271001 No alias External stimuli response.light.red/far red... 0.05 Archaeplastida
Gb_40887 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida
LOC_Os01g52640.3 No alias protein kinase (PEK) 0.06 Archaeplastida
LOC_Os02g53140.1 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 Archaeplastida
MA_423393g0010 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida
Pp3c16_19410V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Pp3c1_13190V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c2_15860V3.1 No alias SPA1-related 3 0.04 Archaeplastida
Pp3c5_26150V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
Solyc07g063120.4.1 No alias protein kinase (PEK). regulator component SPA of... 0.05 Archaeplastida
Solyc08g081990.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida
Solyc12g013840.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.07 Archaeplastida
Zm00001e015983_P001 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 Archaeplastida
Zm00001e019928_P005 No alias protein kinase (PEK). regulator component SPA of... 0.05 Archaeplastida
Zm00001e028209_P002 No alias protein kinase (PEK). regulator component SPA of... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0031082 BLOC complex IEP Neighborhood
CC GO:0031083 BLOC-1 complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 588 623
No external refs found!