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  5. Smo98591

Smo98591


Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0009220 (LandPlants) Phylogenetic Tree(s): OG_05_0009220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98591
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00235220 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
AMTR_s00056p00047160 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
AT3G02450 No alias cell division protein ftsH, putative 0.05 Archaeplastida
AT3G16290 EMB2083 AAA-type ATPase family protein 0.02 Archaeplastida
AT4G23940 No alias FtsH extracellular protease family 0.06 Archaeplastida
Cre03.g201100 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
Cre07.g352350 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.04 Archaeplastida
GSVIVT01017029001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
GSVIVT01019239001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
Gb_12830 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
Gb_28961 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida
LOC_Os04g39190.1 No alias component FtsHi of protein translocation ATPase motor complex 0.03 Archaeplastida
LOC_Os06g51029.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
MA_10435856g0010 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.05 Archaeplastida
MA_10435918g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_188257g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_98203g0010 No alias No annotation 0.04 Archaeplastida
Mp6g01370.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
Mp6g15080.1 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida
Pp3c17_20370V3.1 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Pp3c23_14665V3.1 No alias FtsH extracellular protease family 0.02 Archaeplastida
Solyc03g046340.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida
Solyc08g082530.4.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.12 Archaeplastida
Solyc12g044400.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida
Zm00001e007868_P001 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida
Zm00001e037753_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0009236 cobalamin biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!