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  5. Smo99885

Smo99885


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo99885
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00045p00108620 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00055p00102180 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G02530 PGP12 P-glycoprotein 12 0.02 Archaeplastida
AT1G27940 PGP13 P-glycoprotein 13 0.02 Archaeplastida
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.02 Archaeplastida
AT3G28345 No alias ABC transporter family protein 0.02 Archaeplastida
AT3G28360 PGP16 P-glycoprotein 16 0.05 Archaeplastida
AT3G62150 PGP21 P-glycoprotein 21 0.03 Archaeplastida
AT4G01830 PGP5 P-glycoprotein 5 0.02 Archaeplastida
AT4G25960 PGP2 P-glycoprotein 2 0.04 Archaeplastida
AT5G46540 PGP7 P-glycoprotein 7 0.03 Archaeplastida
GSVIVT01013125001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01028256001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_02468 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_02469 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_08616 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_10211 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_13906 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_13908 No alias ABC transporter B family member 10 OS=Arabidopsis... 0.06 Archaeplastida
Gb_36497 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os01g34970.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g50080.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os02g46680.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
LOC_Os04g38570.1 No alias auxin efflux transporter (ABCB19) 0.02 Archaeplastida
LOC_Os08g45030.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_10432922g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10434957g0010 No alias ABC transporter B family member 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_126766g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_635039g0010 No alias subfamily ABCB transporter 0.01 Archaeplastida
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 Archaeplastida
MA_934204g0010 No alias subfamily ABCB transporter 0.05 Archaeplastida
Mp2g02910.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Mp2g11920.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Mp3g11830.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Pp3c1_34680V3.1 No alias P-glycoprotein 10 0.02 Archaeplastida
Pp3c1_7215V3.1 No alias ATP binding cassette subfamily B19 0.03 Archaeplastida
Pp3c9_13390V3.1 No alias P-glycoprotein 6 0.02 Archaeplastida
Smo230688 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Solyc03g122070.3.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc06g009290.4.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g098840.3.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e014797_P002 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e020770_P002 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e023274_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025063_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025438_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e041008_P003 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 40 305
No external refs found!