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  5. Solyc00g020020.2.1

Solyc00g020020.2.1


Description : no hits & (original description: none)


Gene families : OG0004265 (Archaeplastida) Phylogenetic Tree(s): OG0004265_tree ,
OG_05_0003478 (LandPlants) Phylogenetic Tree(s): OG_05_0003478_tree ,
OG_06_0002787 (SeedPlants) Phylogenetic Tree(s): OG_06_0002787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g020020.2.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
ATCG00500 ACCD acetyl-CoA carboxylase carboxyl transferase subunit beta 0.09 Archaeplastida
Gb_03850 No alias carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.05 Archaeplastida
Gb_06828 No alias large subunit of ribulose-1,5-bisphosphat... 0.06 Archaeplastida
Gb_06829 No alias carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.04 Archaeplastida
Gb_09759 No alias Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.06 Archaeplastida
Gb_15504 No alias carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.04 Archaeplastida
Gb_17284 No alias carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.03 Archaeplastida
Solyc00g500065.1.1 No alias component PsaI of PS-I complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!