Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.27
Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor
Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00021p00057700 | |
Cluster | HCCA: Cluster_157 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G60200 | TMO6 | TARGET OF MONOPTEROS 6 | 0.02 | Archaeplastida | |
GSVIVT01002242001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | Archaeplastida | |
GSVIVT01034189001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | Archaeplastida | |
LOC_Os01g17000.1 | No alias | transcription factor (DOF) | 0.02 | Archaeplastida | |
Pp3c14_24190V3.1 | No alias | cycling DOF factor 3 | 0.02 | Archaeplastida | |
Pp3c9_4910V3.1 | No alias | cycling DOF factor 2 | 0.02 | Archaeplastida | |
Solyc03g112930.3.1 | No alias | transcription factor (DOF) | 0.03 | Archaeplastida | |
Solyc08g082910.2.1 | No alias | transcription factor (DOF) | 0.02 | Archaeplastida | |
Zm00001e004476_P002 | No alias | transcription factor (DOF) | 0.03 | Archaeplastida | |
Zm00001e019172_P001 | No alias | transcription factor (DOF) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | Neighborhood |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Neighborhood |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Neighborhood |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Neighborhood |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Neighborhood |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 41 | 99 |
No external refs found! |