Description : Photosystem II CP43 reaction center protein OS=Lepidium virginicum (sp|a4qla2|psbc_lepvr : 168.0)
Gene families : OG0001539 (Archaeplastida) Phylogenetic Tree(s): OG0001539_tree ,
OG_05_0001136 (LandPlants) Phylogenetic Tree(s): OG_05_0001136_tree ,
OG_06_0000942 (SeedPlants) Phylogenetic Tree(s): OG_06_0000942_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc00g230070.1.1 | |
Cluster | HCCA: Cluster_84 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s01196p00010070 | evm_27.TU.AmTr_v1... | Photosystem II CP43 reaction center protein OS=Carica papaya | 0.03 | Archaeplastida | |
AMTR_s04036p00005710 | evm_27.TU.AmTr_v1... | Photosystem II CP43 reaction center protein... | 0.03 | Archaeplastida | |
ATCG00280 | PSBC | photosystem II reaction center protein C | 0.03 | Archaeplastida | |
GSVIVT01027074001 | No alias | No description available | 0.03 | Archaeplastida | |
Gb_09041 | No alias | component PsbD/D2 of PS-II reaction center complex | 0.04 | Archaeplastida | |
Gb_19166 | No alias | Photosystem II CP43 reaction center protein... | 0.04 | Archaeplastida | |
LOC_Os02g24632.1 | No alias | component PsbC/CP43 of PS-II reaction center complex | 0.04 | Archaeplastida | |
LOC_Os04g16874.1 | No alias | component PsbC/CP43 of PS-II reaction center complex | 0.03 | Archaeplastida | |
LOC_Os10g21212.1 | No alias | component PsbC/CP43 of PS-II reaction center complex | 0.04 | Archaeplastida | |
Solyc00g500054.1.1 | No alias | component PsbD/D2 of PS-II reaction center complex.... | 0.04 | Archaeplastida | |
Solyc00g500136.1.1 | No alias | component PsbD/D2 of PS-II reaction center complex.... | 0.04 | Archaeplastida | |
Solyc00g500206.1.1 | No alias | component PsbD/D2 of PS-II reaction center complex.... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009521 | photosystem | IEA | Interproscan |
BP | GO:0009767 | photosynthetic electron transport chain | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016168 | chlorophyll binding | IEA | Interproscan |
BP | GO:0019684 | photosynthesis, light reaction | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
BP | GO:0015977 | carbon fixation | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000932 | PS_antenna-like | 31 | 87 |
No external refs found! |