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  5. Solyc00g500023.1.1

Solyc00g500023.1.1


Description : ATP-dependent Clp protease proteolytic subunit OS=Solanum lycopersicum (sp|q2mi76|clpp_sollc : 318.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 251.5)


Gene families : OG0005411 (Archaeplastida) Phylogenetic Tree(s): OG0005411_tree ,
OG_05_0003897 (LandPlants) Phylogenetic Tree(s): OG_05_0003897_tree ,
OG_06_0002670 (SeedPlants) Phylogenetic Tree(s): OG_06_0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500023.1.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00670 CLPP1, PCLPP plastid-encoded CLP P 0.09 Archaeplastida
LOC_Os06g39712.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
LOC_Os08g15270.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida
LOC_Os10g21300.1 No alias ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.03 Archaeplastida
LOC_Os12g10590.1 No alias ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.06 Archaeplastida
Mpzg01030.3 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
Zm00001e003904_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.05 Archaeplastida
Zm00001e042026_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.05 Archaeplastida
Zm00001e042065_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.05 Archaeplastida
Zm00001e042085_P001 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 1 144
No external refs found!