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Description : DNA-directed RNA polymerase subunit alpha OS=Solanum tuberosum (sp|q2vee8|rpoa_soltu : 173.0)
Gene families : OG0003076 (Archaeplastida) Phylogenetic Tree(s): OG0003076_tree ,
OG_05_0002303 (LandPlants) Phylogenetic Tree(s): OG_05_0002303_tree ,
OG_06_0001676 (SeedPlants) Phylogenetic Tree(s): OG_06_0001676_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc00g500029.1.1 | |
| Cluster | HCCA: Cluster_191 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00740 | RPOA | RNA polymerase subunit alpha | 0.07 | Archaeplastida | |
| Gb_17282 | No alias | DNA-directed RNA polymerase subunit alpha OS=Cycas... | 0.04 | Archaeplastida | |
| Gb_25929 | No alias | DNA-directed RNA polymerase subunit alpha OS=Cycas... | 0.04 | Archaeplastida | |
| Gb_36750 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.03 | Archaeplastida | |
| LOC_Os04g16842.1 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.06 | Archaeplastida | |
| LOC_Os06g39700.1 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.04 | Archaeplastida | |
| LOC_Os09g07910.1 | No alias | DNA-directed RNA polymerase subunit alpha OS=Oryza... | 0.06 | Archaeplastida | |
| Mpzg00720.1 | No alias | RpoA core component plastid-encoded RNA polymerase | 0.03 | Archaeplastida | |
| Zm00001e015949_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e042025_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e042047_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e042064_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e042086_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |