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  5. Solyc00g500070.1.1

Solyc00g500070.1.1


Description : ATP-dependent Clp protease proteolytic subunit OS=Solanum lycopersicum (sp|q2mi76|clpp_sollc : 262.0)


Gene families : OG0005411 (Archaeplastida) Phylogenetic Tree(s): OG0005411_tree ,
OG_05_0003897 (LandPlants) Phylogenetic Tree(s): OG_05_0003897_tree ,
OG_06_0002670 (SeedPlants) Phylogenetic Tree(s): OG_06_0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500070.1.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00125230 evm_27.TU.AmTr_v1... ATP-dependent Clp protease proteolytic subunit... 0.03 Archaeplastida
LOC_Os08g15270.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 1 70
No external refs found!