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  5. Solyc00g500221.1.1

Solyc00g500221.1.1


Description : no hits & (original description: none)


Gene families : OG0006127 (Archaeplastida) Phylogenetic Tree(s): OG0006127_tree ,
OG_05_0004173 (LandPlants) Phylogenetic Tree(s): OG_05_0004173_tree ,
OG_06_0002678 (SeedPlants) Phylogenetic Tree(s): OG_06_0002678_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500221.1.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500097.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g013995.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g081780.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g045450.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 52 133
No external refs found!