1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc00g500241.1.1

Solyc00g500241.1.1


Description : Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana (sp|p93286|ccmfc_arath : 359.0)


Gene families : OG0004751 (Archaeplastida) Phylogenetic Tree(s): OG0004751_tree ,
OG_05_0003275 (LandPlants) Phylogenetic Tree(s): OG_05_0003275_tree ,
OG_06_0002337 (SeedPlants) Phylogenetic Tree(s): OG_06_0002337_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500241.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00228710 evm_27.TU.AmTr_v1... Cytochrome c biogenesis CcmF C-terminal-like... 0.09 Archaeplastida
AT2G07815 No alias BEST Arabidopsis thaliana protein match is: cytochrome C... 0.15 Archaeplastida
ATMG00180 CCB452 cytochrome C biogenesis 452 0.14 Archaeplastida
Gb_01757 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.14 Archaeplastida
Pp3c4_28970V3.1 No alias cytochrome C biogenesis 452 0.06 Archaeplastida
Zm00001e042200_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.03 Archaeplastida
Zm00001e042201_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.05 Archaeplastida
Zm00001e042314_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.05 Archaeplastida
Zm00001e042392_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.05 Archaeplastida
Zm00001e042398_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.05 Archaeplastida
Zm00001e042422_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.05 Archaeplastida
Zm00001e042430_P001 No alias Cytochrome c biogenesis CcmF C-terminal-like... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR032523 CcmF_C 513 589
No external refs found!