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  5. Solyc00g500242.1.1

Solyc00g500242.1.1


Description : component CcmC of CCM cytochrome c maturation system (system I)


Gene families : OG0008905 (Archaeplastida) Phylogenetic Tree(s): OG0008905_tree ,
OG_05_0010150 (LandPlants) Phylogenetic Tree(s): OG_05_0010150_tree ,
OG_06_0009053 (SeedPlants) Phylogenetic Tree(s): OG_06_0009053_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500242.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271410 evm_27.TU.AmTr_v1... Cellular respiration.oxidative... 0.05 Archaeplastida
AT2G07681 No alias Cytochrome C assembly protein 0.14 Archaeplastida
AT2G07771 No alias No description available 0.11 Archaeplastida
ATMG00890 ORF106D BEST Arabidopsis thaliana protein match is: Cytochrome C... 0.07 Archaeplastida
ATMG00900 CCB256 cytochrome C biogenesis 256 0.11 Archaeplastida
Gb_10329 No alias component CcmC of CCM cytochrome c maturation system (system I) 0.08 Archaeplastida
Gb_11041 No alias component CcmC of CCM cytochrome c maturation system (system I) 0.06 Archaeplastida
Gb_34378 No alias component CcmC of CCM cytochrome c maturation system (system I) 0.05 Archaeplastida
LOC_Os12g34012.1 No alias component CcmC of CCM cytochrome c maturation system (system I) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 18 175
No external refs found!