1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc00g500253.1.1

Solyc00g500253.1.1


Description : NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris (sp|q04050|nu4m_bracm : 268.0)


Gene families : OG0001744 (Archaeplastida) Phylogenetic Tree(s): OG0001744_tree ,
OG_05_0006066 (LandPlants) Phylogenetic Tree(s): OG_05_0006066_tree ,
OG_06_0005246 (SeedPlants) Phylogenetic Tree(s): OG_06_0005246_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500253.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00157590 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
ATCG01050 NDHD NADH-Ubiquinone/plastoquinone (complex I) protein 0.06 Archaeplastida
ATMG00580 NAD4 NADH dehydrogenase subunit 4 0.18 Archaeplastida
GSVIVT01004976001 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 Archaeplastida
Gb_07659 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.04 Archaeplastida
LOC_Os06g46435.1 No alias component NdhD of NDH membrane subcomplex M 0.07 Archaeplastida
LOC_Os07g22504.1 No alias component NdhD of NDH membrane subcomplex M 0.05 Archaeplastida
LOC_Os12g34094.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Triticum... 0.11 Archaeplastida
Mp5g13050.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Mp8g02440.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c2_30660V3.1 No alias NADH dehydrogenase subunit 4 0.04 Archaeplastida
Smo137786 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 Archaeplastida
Solyc01g065585.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Solyc01g065610.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Solyc01g065640.3.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Solyc02g011750.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Solyc10g047420.3.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.05 Archaeplastida
Solyc11g021213.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Solyc11g021215.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000260 NADH4_N 83 144
No external refs found!