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  5. Solyc00g500260.1.1

Solyc00g500260.1.1


Description : cytochrome b component of cytochrome c reductase complex. component mtRPL5 of large ribosomal subunit proteome


Gene families : OG0001809 (Archaeplastida) Phylogenetic Tree(s): OG0001809_tree ,
OG_05_0001335 (LandPlants) Phylogenetic Tree(s): OG_05_0001335_tree ,
OG_06_0002478 (SeedPlants) Phylogenetic Tree(s): OG_06_0002478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500260.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00187470 evm_27.TU.AmTr_v1... Cytochrome b OS=Marchantia polymorpha 0.05 Archaeplastida
AT2G07727 No alias Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal 0.15 Archaeplastida
ATCG00720 PETB photosynthetic electron transfer B 0.07 Archaeplastida
GSVIVT01012279001 No alias Cytochrome b OS=Zea mays 0.03 Archaeplastida
GSVIVT01018702001 No alias Cytochrome b OS=Zea mays 0.03 Archaeplastida
Gb_16762 No alias cytochrome b component of cytochrome c reductase complex 0.12 Archaeplastida
Gb_17283 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.09 Archaeplastida
Gb_20951 No alias Cytochrome b OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_36746 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.03 Archaeplastida
LOC_Os01g57942.1 No alias apocytochrome b component PetB of cytochrome b6/f complex 0.06 Archaeplastida
LOC_Os04g16846.1 No alias apocytochrome b component PetB of cytochrome b6/f complex 0.06 Archaeplastida
LOC_Os10g21324.1 No alias apocytochrome b component PetB of cytochrome b6/f complex 0.06 Archaeplastida
MA_10392603g0010 No alias Cytochrome b OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g00740.1 No alias Cytochrome b6 OS=Marchantia polymorpha... 0.06 Archaeplastida
Smo139134 No alias Cytochrome b OS=Marchantia polymorpha 0.03 Archaeplastida
Solyc00g500027.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e017084_P001 No alias cytochrome b component of cytochrome c reductase complex 0.06 Archaeplastida
Zm00001e023252_P001 No alias cytochrome b component of cytochrome c reductase complex 0.06 Archaeplastida
Zm00001e042123_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e042242_P001 No alias cytochrome b component of cytochrome c reductase complex 0.06 Archaeplastida
Zm00001e042335_P001 No alias cytochrome b component of cytochrome c reductase complex 0.06 Archaeplastida
Zm00001e042463_P001 No alias cytochrome b component of cytochrome c reductase complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005798 Cyt_b/b6_C 801 902
IPR005797 Cyt_b/b6_N 601 747
No external refs found!