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  5. Solyc00g500354.1.1

Solyc00g500354.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 122.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500354.1.1
Cluster HCCA: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Solyc01g067045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc02g014543.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g014547.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc02g030461.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.01 Archaeplastida
Solyc03g044797.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc04g007855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g049075.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc04g064805.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc05g015651.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc05g050825.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc06g035495.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g065845.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g068717.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc09g011125.1.1 No alias No annotation 0.1 Archaeplastida
Solyc09g064243.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.11 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc10g074433.1.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc10g074824.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc10g076405.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc11g007915.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.04 Archaeplastida
Solyc12g035192.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g042855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!