Solyc00g500363.1.1

Description : Ribosomal protein S14, mitochondrial OS=Oenothera berteroana (sp|p14875|rt14_oenbe : 90.5)

Gene families : OG0004252 (Archaeplastida) Phylogenetic Tree(s): OG0004252_tree ,
OG_05_0002312 (LandPlants) Phylogenetic Tree(s): OG_05_0002312_tree ,
OG_06_0011343 (SeedPlants) Phylogenetic Tree(s): OG_06_0011343_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc00g500363.1.1
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
ATCG00330	RPS14	chloroplast ribosomal protein S14	0.07	Archaeplastida
Gb_19154	No alias	component psRPS14 of small ribosomal subunit proteome	0.09	Archaeplastida
LOC_Os04g16745.1	No alias	component psRPS14 of small ribosomal subunit proteome	0.05	Archaeplastida
LOC_Os10g21244.1	No alias	component psRPS14 of small ribosomal subunit proteome	0.05	Archaeplastida
LOC_Os10g38238.1	No alias	component psRPS14 of small ribosomal subunit proteome	0.05	Archaeplastida
Smo137764	No alias	Protein biosynthesis.organelle translation...	0.04	Archaeplastida
Solyc00g500055.1.1	No alias	component psRPS14 of small ribosomal subunit proteome	0.07	Archaeplastida
Solyc00g500137.1.1	No alias	component psRPS14 of small ribosomal subunit proteome	0.07	Archaeplastida
Solyc00g500207.1.1	No alias	component psRPS14 of small ribosomal subunit proteome	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
BP	GO:0017004	cytochrome complex assembly	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001209	Ribosomal_S14	26	79

External Links

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Solyc00g500363.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation