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  5. AMTR_s00021p00120690

AMTR_s00021p00120690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.68

Description : Protein trichome birefringence-like 38 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00120690
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT3G11570 TBL8 TRICHOME BIREFRINGENCE-LIKE 8 0.03 Archaeplastida
Gb_19983 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
MA_2603g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Archaeplastida
Solyc01g068430.3.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g005790.3.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g014360.2.1 No alias Protein trichome birefringence-like 41 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e028615_P001 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 37 90
IPR026057 PC-Esterase 91 356
No external refs found!