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  5. Solyc01g005130.2.1

Solyc01g005130.2.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0002182 (SeedPlants) Phylogenetic Tree(s): OG_06_0002182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005130.2.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT5G14010 KNU C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01011890001 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_54742g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g107430.2.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!