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  5. Solyc01g005370.3.1

Solyc01g005370.3.1


Description : Probable calcium-binding protein CML25 OS=Arabidopsis thaliana (sp|q9fyk2|cml25_arath : 170.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0000352 (SeedPlants) Phylogenetic Tree(s): OG_06_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005370.3.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
AMTR_s00077p00177420 evm_27.TU.AmTr_v1... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT3G22930 CML11 calmodulin-like 11 0.01 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
Cre03.g150300 No alias Calmodulin-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Gb_15867 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 150.0) 0.04 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_30178 No alias Calmodulin-like protein 6 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.01 Archaeplastida
LOC_Os03g59770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g13580.1 No alias Probable calcium-binding protein CML18 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os05g24780.1 No alias Probable calcium-binding protein CML21 OS=Oryza sativa... 0.01 Archaeplastida
LOC_Os07g12240.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g04890.1 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.01 Archaeplastida
LOC_Os11g38780.1 No alias no description available(sp|q93z27|cml46_arath : 99.8) 0.01 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_822732g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Pp3c13_2420V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c16_23390V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.02 Archaeplastida
Solyc06g150132.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.01 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 105 167
IPR002048 EF_hand_dom 31 92
No external refs found!