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Description : Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula (sp|d1fp53|lin_medtr : 90.9)
Gene families : OG0001418 (Archaeplastida) Phylogenetic Tree(s): OG0001418_tree ,
OG_05_0001365 (LandPlants) Phylogenetic Tree(s): OG_05_0001365_tree ,
OG_06_0016756 (SeedPlants) Phylogenetic Tree(s): OG_06_0016756_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g006380.2.1 | |
| Cluster | HCCA: Cluster_210 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00231470 | evm_27.TU.AmTr_v1... | Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus | 0.03 | Archaeplastida | |
| LOC_Os02g07190.1 | No alias | Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... | 0.04 | Archaeplastida | |
| MA_126120g0010 | No alias | Putative E3 ubiquitin-protein ligase LIN OS=Medicago... | 0.04 | Archaeplastida | |
| Zm00001e016398_P001 | No alias | ubiquitin E3 ligase (CERBERUS/LIN) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009606 | tropism | IEP | Neighborhood |
| BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
| BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Neighborhood |
| BP | GO:0015743 | malate transport | IEP | Neighborhood |
| BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |