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  5. Solyc01g006620.3.1

Solyc01g006620.3.1


Description : no description available(sp|q9m2r0|ftip3_arath : 1132.0)


Gene families : OG0000149 (Archaeplastida) Phylogenetic Tree(s): OG0000149_tree ,
OG_05_0000184 (LandPlants) Phylogenetic Tree(s): OG_05_0000184_tree ,
OG_06_0000152 (SeedPlants) Phylogenetic Tree(s): OG_06_0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g006620.3.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00091660 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G61300 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 Archaeplastida
AT4G00700 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.06 Archaeplastida
AT4G11610 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.05 Archaeplastida
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.07 Archaeplastida
AT5G48060 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Archaeplastida
GSVIVT01028466001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_20033 No alias no description available(sp|q9m2r0|ftip3_arath : 959.0) 0.07 Archaeplastida
Gb_33902 No alias no description available(sp|q60ew9|ftip7_orysj : 1244.0) 0.02 Archaeplastida
LOC_Os01g40480.1 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g44490.1 No alias no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.08 Archaeplastida
LOC_Os04g39680.1 No alias FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g59520.1 No alias no description available(sp|q9m2r0|ftip3_arath : 977.0) 0.07 Archaeplastida
LOC_Os05g35480.1 No alias no description available(sp|q9m2r0|ftip3_arath : 998.0) 0.04 Archaeplastida
LOC_Os06g41090.1 No alias no description available(sp|q69t22|ftip1_orysj : 1449.0) 0.07 Archaeplastida
LOC_Os07g07070.1 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435265g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7640327g0010 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo108987 No alias Protein QUIRKY OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e007510_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 1014.0) 0.09 Archaeplastida
Zm00001e012377_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.02 Archaeplastida
Zm00001e023184_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 827.0) 0.12 Archaeplastida
Zm00001e024540_P001 No alias no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.03 Archaeplastida
Zm00001e027805_P001 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 613 768
IPR000008 C2_dom 203 308
IPR000008 C2_dom 43 145
IPR000008 C2_dom 364 468
No external refs found!