AMTR_s00021p00135720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.90

No description available


Gene families : OG0002481 (Archaeplastida) Phylogenetic Tree(s): OG0002481_tree ,
OG_05_0007192 (LandPlants) Phylogenetic Tree(s): OG_05_0007192_tree ,
OG_06_0008760 (SeedPlants) Phylogenetic Tree(s): OG_06_0008760_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00135720
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
MA_10430457g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435851g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo169553 No alias No description available 0.02 Archaeplastida
Solyc11g007710.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016461_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007402 DUF455 88 335
No external refs found!