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  5. Solyc01g007800.3.1

Solyc01g007800.3.1


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g007800.3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00234860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
AMTR_s00030p00235460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.05 Archaeplastida
AT5G04820 ATOFP13, OFP13 ovate family protein 13 0.05 Archaeplastida
Gb_27133 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os05g36970.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os05g44090.1 No alias transcription factor (OFP) 0.08 Archaeplastida
Mp3g18940.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc09g065350.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008181_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e016408_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e031340_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e032149_P001 No alias transcription factor (OFP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 102 158
No external refs found!