AMTR_s00021p00147150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.100

Description : Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica


Gene families : OG0000586 (Archaeplastida) Phylogenetic Tree(s): OG0000586_tree ,
OG_05_0016885 (LandPlants) Phylogenetic Tree(s): OG_05_0016885_tree ,
OG_06_0019605 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00147150
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00138520 evm_27.TU.AmTr_v1... Probable galactinol--sucrose galactosyltransferase 2... 0.05 Archaeplastida
GSVIVT01034980001 No alias Stachyose synthase OS=Pisum sativum 0.04 Archaeplastida
Gb_08721 No alias Probable galactinol--sucrose galactosyltransferase 2... 0.04 Archaeplastida
Gb_25106 No alias galactinol-sucrose galactosyltransferase 0.04 Archaeplastida
LOC_Os01g07530.1 No alias raffinose synthase 0.06 Archaeplastida
LOC_Os06g07600.1 No alias galactinol-sucrose galactosyltransferase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 267 328
IPR008811 Glycosyl_hydrolases_36 7 240
No external refs found!