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  5. AMTR_s00021p00158910

AMTR_s00021p00158910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.112

Description : Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0005057 (SeedPlants) Phylogenetic Tree(s): OG_06_0005057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00158910
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT2G33990 iqd9 IQ-domain 9 0.08 Archaeplastida
AT3G15050 IQD10 IQ-domain 10 0.04 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.03 Archaeplastida
GSVIVT01038630001 No alias No description available 0.03 Archaeplastida
Gb_26871 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_36296 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_40747 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.03 Archaeplastida
LOC_Os01g61720.8 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g03190.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g30630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g46350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430537g0020 No alias Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430537g0050 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_40034g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9851g0010 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Smo438938 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g009340.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g077260.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc06g052010.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g007410.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g084280.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 69 87
No external refs found!