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  5. AMTR_s00021p00169740

AMTR_s00021p00169740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.121

No description available


Gene families : OG0008894 (Archaeplastida) Phylogenetic Tree(s): OG0008894_tree ,
OG_05_0008607 (LandPlants) Phylogenetic Tree(s): OG_05_0008607_tree ,
OG_06_0005523 (SeedPlants) Phylogenetic Tree(s): OG_06_0005523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00169740
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT2G42370 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 Archaeplastida
Zm00001e014343_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024915_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016073 snRNA metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
BP GO:0031120 snRNA pseudouridine synthesis IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0040031 snRNA modification IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!