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Description : alpha-class expansin
Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0084688 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g010890.4.1 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G20190 | ATEXPA11, ATHEXP... | expansin 11 | 0.02 | Archaeplastida | |
| AT1G26770 | ATEXPA10,... | expansin A10 | 0.04 | Archaeplastida | |
| AT2G37640 | ATEXPA3, EXP3,... | Barwin-like endoglucanases superfamily protein | 0.02 | Archaeplastida | |
| AT2G40610 | EXPA8, ATHEXP... | expansin A8 | 0.02 | Archaeplastida | |
| AT3G29030 | EXP5, ATHEXP... | expansin A5 | 0.03 | Archaeplastida | |
| GSVIVT01025509001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| GSVIVT01029411001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| GSVIVT01032681001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01033691001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| GSVIVT01035233001 | No alias | Expansin-A13 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Gb_01502 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_01505 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Gb_01506 | No alias | Expansin-A8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Gb_07438 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Gb_09118 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os04g49410.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os08g44790.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os12g36040.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_130258g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_134592g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_30127g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_45587g0020 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_792493g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_91602g0010 | No alias | Expansin-A2 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Mp2g18610.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp5g20420.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Mp8g18860.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Pp3c14_18030V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c18_19660V3.1 | No alias | expansin A9 | 0.05 | Archaeplastida | |
| Pp3c21_1940V3.1 | No alias | expansin A9 | 0.03 | Archaeplastida | |
| Pp3c24_15400V3.1 | No alias | expansin A15 | 0.02 | Archaeplastida | |
| Pp3c3_16280V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c8_13450V3.1 | No alias | expansin A1 | 0.02 | Archaeplastida | |
| Pp3c8_14900V3.1 | No alias | expansin A14 | 0.03 | Archaeplastida | |
| Smo409954 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| Smo419575 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| Smo91129 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Solyc06g076220.3.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e003888_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e003889_P001 | No alias | alpha-class expansin | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Neighborhood |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Neighborhood |
| MF | GO:0030570 | pectate lyase activity | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| No external refs found! |