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  5. Solyc01g014963.1.1

Solyc01g014963.1.1


Description : no hits & (original description: none)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g014963.1.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc01g106575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Solyc01g150141.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Solyc02g024045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Solyc04g054529.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc05g013617.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc06g053665.1.1 No alias No annotation 0.08 Archaeplastida
Solyc06g066853.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc10g050513.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc10g074433.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc10g074475.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc11g045125.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 2 102
No external refs found!