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  5. Solyc01g016380.4.1

Solyc01g016380.4.1


Description : Protein trichome birefringence OS=Arabidopsis thaliana (sp|q9fg35|tbr_arath : 333.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g016380.4.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT1G29050 TBL38 TRICHOME BIREFRINGENCE-LIKE 38 0.03 Archaeplastida
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
GSVIVT01010030001 No alias Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032800001 No alias Cell wall.hemicellulose.xylan.modification and... 0.03 Archaeplastida
GSVIVT01035039001 No alias Protein trichome birefringence-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g30970.1 No alias Protein trichome birefringence-like 8 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os05g35190.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g46230.1 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 Archaeplastida
MA_10436708g0010 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.03 Archaeplastida
MA_128999g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 Archaeplastida
MA_7200g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e023925_P001 No alias Protein ESKIMO 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030411_P001 No alias Protein trichome birefringence-like 5 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e039345_P001 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 2 225
No external refs found!