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  5. Solyc01g016665.1.1

Solyc01g016665.1.1


Description : transcription factor (FAR1)


Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0001378 (SeedPlants) Phylogenetic Tree(s): OG_06_0001378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g016665.1.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G32250 FRS2 FAR1-related sequence 2 0.03 Archaeplastida
LOC_Os03g62660.1 No alias transcription factor (FAR1) 0.01 Archaeplastida
LOC_Os08g06930.1 No alias transcription factor (FAR1) 0.02 Archaeplastida
Solyc03g082435.1.1 No alias transcription factor (FAR1) 0.02 Archaeplastida
Solyc03g113110.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc03g150148.1.1 No alias no hits & (original description: none) 0.33 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 148 242
No external refs found!