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  5. Solyc01g017230.2.1

Solyc01g017230.2.1


Description : NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum lycopersicum (sp|q32516|nu5c_sollc : 115.0)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0012444 (SeedPlants) Phylogenetic Tree(s): OG_06_0012444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g017230.2.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.01 Archaeplastida
AMTR_s00063p00185460 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.01 Archaeplastida
AMTR_s00076p00111250 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.01 Archaeplastida
AMTR_s00334p00015340 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.01 Archaeplastida
AMTR_s01196p00002960 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.01 Archaeplastida
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.01 Archaeplastida
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.02 Archaeplastida
GSVIVT01009295001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.01 Archaeplastida
GSVIVT01017483001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.01 Archaeplastida
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.01 Archaeplastida
Gb_09027 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.03 Archaeplastida
Gb_11361 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Gb_11944 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.03 Archaeplastida
LOC_Os04g16760.1 No alias apoprotein PsaA of PS-I complex 0.02 Archaeplastida
LOC_Os05g01675.1 No alias apoprotein PsaA of PS-I complex 0.02 Archaeplastida
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.02 Archaeplastida
Mp1g16220.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.02 Archaeplastida
Mp3g20630.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.02 Archaeplastida
Smo236842 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.03 Archaeplastida
Solyc00g500056.1.1 No alias apoprotein PsaB of PS-I complex 0.02 Archaeplastida
Solyc00g500057.1.1 No alias apoprotein PsaA of PS-I complex 0.02 Archaeplastida
Solyc00g500138.1.1 No alias apoprotein PsaB of PS-I complex 0.02 Archaeplastida
Solyc00g500139.1.1 No alias apoprotein PsaA of PS-I complex 0.03 Archaeplastida
Solyc00g500208.1.1 No alias apoprotein PsaB of PS-I complex 0.02 Archaeplastida
Solyc00g500209.1.1 No alias apoprotein PsaA of PS-I complex 0.02 Archaeplastida
Solyc02g020960.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g036320.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Zea... 0.04 Archaeplastida
Solyc06g009940.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.02 Archaeplastida
Solyc12g035580.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Solyc12g062610.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Citrus... 0.07 Archaeplastida
Zm00001e003909_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Zm00001e008601_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Zm00001e042034_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Zm00001e042035_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042055_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Zm00001e042056_P001 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Zm00001e042075_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Zm00001e042076_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042077_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Zm00001e042099_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Zm00001e042100_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042101_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Zm00001e042150_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Zm00001e042151_P001 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Zm00001e042164_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042165_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e042235_P001 No alias apoprotein PsaB of PS-I complex 0.04 Archaeplastida
Zm00001e042354_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Zm00001e042373_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e042404_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Zm00001e042440_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002128 NADH_UbQ_OxRdtase_chlpt_su5_C 3 67
No external refs found!