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  5. Solyc01g017600.3.1

Solyc01g017600.3.1


Description : no hits & (original description: none)


Gene families : OG0000612 (Archaeplastida) Phylogenetic Tree(s): OG0000612_tree ,
OG_05_0001252 (LandPlants) Phylogenetic Tree(s): OG_05_0001252_tree ,
OG_06_0000759 (SeedPlants) Phylogenetic Tree(s): OG_06_0000759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g017600.3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT5G19870 No alias Family of unknown function (DUF716) 0.04 Archaeplastida
Gb_07540 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_08550 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g36040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_135096g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_14270V3.1 No alias Family of unknown function (DUF716) 0.03 Archaeplastida
Smo227322 No alias No description available 0.03 Archaeplastida
Solyc09g090560.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR006904 DUF716_TMEM45 122 258
No external refs found!