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  5. Solyc01g044340.3.1

Solyc01g044340.3.1


Description : no hits & (original description: none)


Gene families : OG0000511 (Archaeplastida) Phylogenetic Tree(s): OG0000511_tree ,
OG_05_0001468 (LandPlants) Phylogenetic Tree(s): OG_05_0001468_tree ,
OG_06_0001396 (SeedPlants) Phylogenetic Tree(s): OG_06_0001396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g044340.3.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os04g41470.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.07 Archaeplastida
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Pp3c20_6730V3.1 No alias IBR domain-containing protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!