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  5. Solyc01g049950.1.1

Solyc01g049950.1.1


Description : 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum (sp|p51409|rm05_soltu : 84.3)


Gene families : OG0006469 (Archaeplastida) Phylogenetic Tree(s): OG0006469_tree ,
OG_05_0002312 (LandPlants) Phylogenetic Tree(s): OG_05_0002312_tree ,
OG_06_0003941 (SeedPlants) Phylogenetic Tree(s): OG_06_0003941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g049950.1.1
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00223510 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Brassica napus 0.02 Archaeplastida
AMTR_s00251p00014110 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
AMTR_s00370p00007710 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.02 Archaeplastida
Mp2g12110.1 No alias component mtRPL5 of large ribosomal subunit proteome 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!