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  5. Solyc01g056620.4.1

Solyc01g056620.4.1


Description : component DRB4 of DRB4-DRB7.1 siRNA biogenesis regulator complex


Gene families : OG0000434 (Archaeplastida) Phylogenetic Tree(s): OG0000434_tree ,
OG_05_0000373 (LandPlants) Phylogenetic Tree(s): OG_05_0000373_tree ,
OG_06_0000829 (SeedPlants) Phylogenetic Tree(s): OG_06_0000829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g056620.4.1
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g56520.1 No alias component DRB4 of DRB4-DRB7.1 siRNA biogenesis regulator complex 0.03 Archaeplastida
Pp3c17_2200V3.1 No alias dsRNA-binding domain-like superfamily protein 0.02 Archaeplastida
Zm00001e019685_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034508 centromere complex assembly IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 83 148
IPR014720 dsRBD_dom 5 71
No external refs found!