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  5. Solyc01g058205.1.1

Solyc01g058205.1.1


Description : Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana (sp|q9m302|pp270_arath : 667.0)


Gene families : OG0000198 (Archaeplastida) Phylogenetic Tree(s): OG0000198_tree ,
OG_05_0000086 (LandPlants) Phylogenetic Tree(s): OG_05_0000086_tree ,
OG_06_0000170 (SeedPlants) Phylogenetic Tree(s): OG_06_0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g058205.1.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Mp3g05190.1 No alias Pentatricopeptide repeat-containing protein At1g62930,... 0.01 Archaeplastida
Solyc01g096210.4.1 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 527 575
IPR002885 Pentatricopeptide_repeat 146 195
IPR002885 Pentatricopeptide_repeat 421 469
IPR002885 Pentatricopeptide_repeat 351 400
IPR002885 Pentatricopeptide_repeat 246 294
IPR002885 Pentatricopeptide_repeat 585 640
IPR002885 Pentatricopeptide_repeat 214 240
IPR002885 Pentatricopeptide_repeat 495 524
IPR002885 Pentatricopeptide_repeat 320 349
No external refs found!