Solyc01g058540.3.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g058540.3.1
Cluster	HCCA: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00102530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00156p00038330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.03	Archaeplastida
Gb_02625	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g43550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g46060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g45230.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os11g29870.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_125146g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_175750g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_47052g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp4g00180.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Smo29146	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc08g081630.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc10g005680.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc12g006170.2.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e015531_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e019827_P003	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e032189_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005811	lipid droplet	IEP	Neighborhood
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Neighborhood
CC	GO:0031011	Ino80 complex	IEP	Neighborhood
CC	GO:0033202	DNA helicase complex	IEP	Neighborhood
CC	GO:0044454	nuclear chromosome part	IEP	Neighborhood
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Neighborhood
CC	GO:0097346	INO80-type complex	IEP	Neighborhood
CC	GO:1904949	ATPase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	158	215

External Links

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Solyc01g058540.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation