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  5. Solyc01g060270.1.1

Solyc01g060270.1.1


Description : Protein trichome birefringence-like 4 OS=Arabidopsis thaliana (sp|q9fj06|tbl4_arath : 484.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g060270.1.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00021p00123440 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 31 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G29050 TBL38 TRICHOME BIREFRINGENCE-LIKE 38 0.04 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.04 Archaeplastida
AT2G34070 TBL37 TRICHOME BIREFRINGENCE-LIKE 37 0.03 Archaeplastida
AT2G38320 TBL34 TRICHOME BIREFRINGENCE-LIKE 34 0.03 Archaeplastida
AT2G40160 TBL30 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT5G06700 TBR Plant protein of unknown function (DUF828) 0.03 Archaeplastida
GSVIVT01001005001 No alias Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017904001 No alias Protein trichome birefringence-like 10 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01030284001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01035039001 No alias Protein trichome birefringence-like 4 OS=Arabidopsis thaliana 0.07 Archaeplastida
LOC_Os01g30970.1 No alias Protein trichome birefringence-like 8 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os01g61460.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.07 Archaeplastida
LOC_Os05g28830.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os05g39350.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
LOC_Os07g49280.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_10436441g0020 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_10436708g0010 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 Archaeplastida
MA_119111g0010 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
MA_31151g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_53397g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Archaeplastida
Solyc01g079400.3.1 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.01 Archaeplastida
Solyc05g052450.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc07g053350.4.1 No alias Protein trichome birefringence-like 39 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g062220.3.1 No alias Protein trichome birefringence-like 41 OS=Arabidopsis... 0.01 Archaeplastida
Solyc09g005630.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e027860_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 110 162
IPR026057 PC-Esterase 163 444
No external refs found!