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  5. AMTR_s00021p00219640

AMTR_s00021p00219640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.203

Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)


Gene families : OG0000030 (Archaeplastida) Phylogenetic Tree(s): OG0000030_tree ,
OG_05_0020419 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019607 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00219640
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00194610 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.05 Archaeplastida
GSVIVT01011800001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 Archaeplastida
GSVIVT01030196001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 Archaeplastida
GSVIVT01030594001 No alias Solute transport.carrier-mediated transport.MOP... 0.06 Archaeplastida
Gb_06026 No alias metabolite transporter (DTX) 0.02 Archaeplastida
Gb_25416 No alias metabolite transporter (DTX) 0.05 Archaeplastida
Gb_29740 No alias metabolite transporter (DTX) 0.05 Archaeplastida
Gb_35744 No alias metabolite transporter (DTX) 0.02 Archaeplastida
LOC_Os12g42130.1 No alias metabolite transporter (DTX) 0.02 Archaeplastida
Solyc12g006360.3.1 No alias metabolite transporter (DTX) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA Interproscan
MF GO:0015238 drug transmembrane transporter activity IEA Interproscan
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005850 eukaryotic translation initiation factor 2 complex IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008381 mechanosensitive ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002528 MATE_fam 271 432
IPR002528 MATE_fam 53 209
No external refs found!