Solyc01g065690.3.1

Description : no hits & (original description: none)

Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0011357 (LandPlants) Phylogenetic Tree(s): OG_05_0011357_tree ,
OG_06_0011363 (SeedPlants) Phylogenetic Tree(s): OG_06_0011363_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g065690.3.1
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00054220	evm_27.TU.AmTr_v1...	Heavy metal-associated isoprenylated plant protein 30...	0.03	Archaeplastida
AT1G71050	HIPP20	Heavy metal transport/detoxification superfamily protein	0.05	Archaeplastida
AT2G28660	No alias	Chloroplast-targeted copper chaperone protein	0.03	Archaeplastida
AT3G56240	CCH	copper chaperone	0.03	Archaeplastida
AT4G10465	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
AT4G39700	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
AT5G02600	NAKR1	Heavy metal transport/detoxification superfamily protein	0.07	Archaeplastida
AT5G05365	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
AT5G17450	HIPP21	Heavy metal transport/detoxification superfamily protein	0.03	Archaeplastida
AT5G27690	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
GSVIVT01013424001	No alias	No description available	0.05	Archaeplastida
GSVIVT01019700001	No alias	Heavy metal-associated isoprenylated plant protein 30...	0.06	Archaeplastida
GSVIVT01032731001	No alias	No description available	0.04	Archaeplastida
Gb_12907	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis...	0.02	Archaeplastida
Gb_37169	No alias	Heavy metal-associated isoprenylated plant protein 37...	0.03	Archaeplastida
Gb_38910	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g30570.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c18_2310V3.1	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Archaeplastida
Solyc06g050710.4.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
Zm00001e000154_P001	No alias	Heavy metal-associated isoprenylated plant protein 30...	0.05	Archaeplastida
Zm00001e003565_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	13	66

External Links

No external refs found!

Solyc01g065690.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation