Solyc01g065980.4.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g065980.4.1
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00148470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.04	Archaeplastida
AT1G19210	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G74930	ORA47	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.03	Archaeplastida
AT2G40340	AtERF48, DREB2C	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G11020	DREB2B, DREB2	DRE/CRT-binding protein 2B	0.02	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.05	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01014291001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01016684001	No alias	Ethylene-responsive transcription factor RAP2-12...	0.03	Archaeplastida
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_15343	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g21120.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g09650.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.05	Archaeplastida
LOC_Os03g08470.1	No alias	Ethylene-responsive transcription factor 1 OS=Oryza...	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os06g09790.1	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.08	Archaeplastida
LOC_Os10g25170.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_184464g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_45733g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5280013g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_8384767g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_88g0020	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_904750g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_7800V3.1	No alias	ethylene responsive element binding factor 1	0.04	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
Pp3c4_2680V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_28290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Solyc03g007460.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089910.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc12g056590.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000608_P002	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e002151_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e006692_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e025064_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.02	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.03	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041815_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010038	response to metal ion	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	91	140

External Links

No external refs found!

Solyc01g065980.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation