1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00021p00221400

AMTR_s00021p00221400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.209

Description : Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase I


Gene families : OG0000464 (Archaeplastida) Phylogenetic Tree(s): OG0000464_tree ,
OG_05_0001695 (LandPlants) Phylogenetic Tree(s): OG_05_0001695_tree ,
OG_06_0002143 (SeedPlants) Phylogenetic Tree(s): OG_06_0002143_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00221400
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT5G46290 KAS1, KASI 3-ketoacyl-acyl carrier protein synthase I 0.02 Archaeplastida
GSVIVT01015032001 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.01 Archaeplastida
GSVIVT01019565001 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.01 Archaeplastida
Gb_06837 No alias ketoacyl-ACP synthase I 0.01 Archaeplastida
MA_326409g0010 No alias 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.02 Archaeplastida
Mp2g23470.1 No alias ketoacyl-ACP synthase (mtKAS) 0.01 Archaeplastida
Solyc03g122120.4.1 No alias ketoacyl-ACP synthase II 0.01 Archaeplastida
Solyc12g009260.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR014031 Ketoacyl_synth_C 161 273
IPR014030 Ketoacyl_synth_N 4 152
No external refs found!