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  5. Solyc01g067130.4.1

Solyc01g067130.4.1


Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067130.4.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00239530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
GSVIVT01017741001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.06 Archaeplastida
Gb_00520 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
LOC_Os02g49410.1 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Pp3c15_5200V3.1 No alias nuclear factor Y, subunit B3 0.02 Archaeplastida
Smo100288 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
Smo442185 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.01 Archaeplastida
Solyc04g015060.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Solyc05g005390.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc06g009010.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Solyc09g074760.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Solyc10g009440.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc12g006120.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.06 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.17 Archaeplastida
Zm00001e015699_P001 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Zm00001e021676_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Zm00001e031850_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035517_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 27 91
No external refs found!