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  4. Sequence
  5. Solyc01g067173.1.1

Solyc01g067173.1.1


Description : no hits & (original description: none)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067173.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
ATMG00810 ORF240B DNA/RNA polymerases superfamily protein 0.01 Archaeplastida
Solyc03g079887.1.1 No alias No annotation 0.17 Archaeplastida
Solyc03g082515.1.1 No alias No annotation 0.11 Archaeplastida
Solyc04g056727.1.1 No alias no hits & (original description: none) 0.17 Archaeplastida
Solyc04g150121.1.1 No alias No annotation 0.25 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc07g018325.1.1 No alias No annotation 0.01 Archaeplastida
Solyc07g018437.1.1 No alias No annotation 0.1 Archaeplastida
Solyc10g024387.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc10g044687.1.1 No alias No annotation 0.11 Archaeplastida
Solyc10g049605.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.1 Archaeplastida
Solyc12g036475.1.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!