Solyc01g067540.2.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g067540.2.1
Cluster	HCCA: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00007p00268280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G12890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G71450	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G78080	RAP2.4	related to AP2 4	0.04	Archaeplastida
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.04	Archaeplastida
AT3G14230	RAP2.2	related to AP2 2	0.03	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.04	Archaeplastida
AT5G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G25190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.04	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01014291001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033416001	No alias	External stimuli response.biotic...	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_29263	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.04	Archaeplastida
Gb_36992	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g58420.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os12g39330.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.07	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_8574268g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_896002g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c15_1990V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c26_14710V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c2_15730V3.1	No alias	cytokinin response factor 5	0.04	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g057080.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e003061_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e006139_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.07	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e028920_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.04	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.1	Archaeplastida
Zm00001e033965_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	58	104

External Links

No external refs found!

Solyc01g067540.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation