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  5. Solyc01g068320.3.1

Solyc01g068320.3.1


Description : RDR2-polymerase regulator protein CLSY3/4


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0000597 (LandPlants) Phylogenetic Tree(s): OG_05_0000597_tree ,
OG_06_0000338 (SeedPlants) Phylogenetic Tree(s): OG_06_0000338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g068320.3.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00081110 No alias RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein 0.03 Archaeplastida
AT1G05490 chr31 chromatin remodeling 31 0.06 Archaeplastida
AT2G16390 DMS1, DRD1, CHR35 SNF2 domain-containing protein / helicase... 0.04 Archaeplastida
AT2G21455 No alias No description available 0.04 Archaeplastida
AT3G24340 chr40 chromatin remodeling 40 0.03 Archaeplastida
GSVIVT01013277001 No alias RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein 0.1 Archaeplastida
GSVIVT01023832001 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os02g43460.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.05 Archaeplastida
LOC_Os06g14440.1 No alias chromatin remodeling factor (DRD1). component DRD1 of... 0.02 Archaeplastida
Mp4g09280.1 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c2_3510V3.1 No alias SNF2 domain-containing protein / helicase... 0.03 Archaeplastida
Solyc02g033050.3.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.04 Archaeplastida
Solyc08g061390.3.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc08g077640.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g077660.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000330 SNF2_N 133 409
IPR001650 Helicase_C 466 579
No external refs found!