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  5. Solyc01g079400.3.1

Solyc01g079400.3.1


Description : Protein trichome birefringence-like 6 OS=Arabidopsis thaliana (sp|q9lzq1|tbl6_arath : 551.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079400.3.1
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00162030 No alias Protein trichome birefringence OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G38320 TBL34 TRICHOME BIREFRINGENCE-LIKE 34 0.03 Archaeplastida
AT3G11030 TBL32 TRICHOME BIREFRINGENCE-LIKE 32 0.05 Archaeplastida
AT5G06230 TBL9 TRICHOME BIREFRINGENCE-LIKE 9 0.01 Archaeplastida
GSVIVT01010030001 No alias Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_27831 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g30970.1 No alias Protein trichome birefringence-like 8 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.01 Archaeplastida
LOC_Os05g28630.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_20334g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g060270.1.1 No alias Protein trichome birefringence-like 4 OS=Arabidopsis... 0.01 Archaeplastida
Solyc07g053350.4.1 No alias Protein trichome birefringence-like 39 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e035734_P001 No alias Protein trichome birefringence-like 10 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e041204_P001 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 198 251
IPR026057 PC-Esterase 252 529
No external refs found!