1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g079450.3.1

Solyc01g079450.3.1


Description : Probable glutamyl endopeptidase, chloroplastic OS=Arabidopsis thaliana (sp|q8vzf3|cgep_arath : 1377.0)


Gene families : OG0003187 (Archaeplastida) Phylogenetic Tree(s): OG0003187_tree ,
OG_05_0005448 (LandPlants) Phylogenetic Tree(s): OG_05_0005448_tree ,
OG_06_0009020 (SeedPlants) Phylogenetic Tree(s): OG_06_0009020_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079450.3.1
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00176400 evm_27.TU.AmTr_v1... Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.03 Archaeplastida
AT2G47390 No alias Prolyl oligopeptidase family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000870.32 No alias Probable glutamyl endopeptidase, chloroplastic... 0.02 Archaeplastida
Gb_40375 No alias Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.08 Archaeplastida
LOC_Os03g19410.1 No alias Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.06 Archaeplastida
MA_489360g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g14730.1 No alias Probable glutamyl endopeptidase, chloroplastic... 0.02 Archaeplastida
Pp3c6_17840V3.1 No alias Prolyl oligopeptidase family protein 0.02 Archaeplastida
Zm00001e001435_P001 No alias Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001375 Peptidase_S9 771 923
No external refs found!